ChromosOmics - Database

Icon by Leon Liehr                   

                                                  X-CHROMOSOME -                                                 
NEOCENTRIC
 
Cases without clinical findings
Similar imbalances – no sSMC
Cases with clinical findings
Similar imbalances – no sSMC
Cases without clear clinical correlation
Cases with discontinous sSMC
Cases with complex sSMC
Cases with UPD and sSMC
Cases with neocentromeres
Similar imbalances - no sSMC
Tumor
DISCLAIMER
In general 70% of sSMC carriers are clinically normal. The figures listed above

are based on the bias, that mainly clinically aberrant cases are studied and reported in literature!


UPD (uniparental disomy) cases: UPD(X)mat UPD(X)pat UPD(X)mat or pat

Cases with neocentromeres (N)

case no.
gender/
age at diagnosis

studied
material

de novo/
inherited

GTG-banding result
grade of mosaicism

final result of the sSMC
test
methods

clinical symptoms
Reference
0X-
N-

pt22.31/
1-1
female/
newborn
PBL de novo 47,XX,+mar[100%] inv dup(X)(pterp22.31:
:p22.31
pter)
midi; telomeric probe see below {30; 36}
born after spontaneous vaginal delivery at 40 weeks gestation. No history of miscarriages, mental retardation, or congenital defects in family; pregnancy normal. birth weight 2.84 kg. Dysmorphic features: prominent forehead, hypertelorism, down-slanting palpebral fissures, low-set/large ears, flat nasal bridge with anteverted nares and macroglossia. also umbilical hernia, hypotonia, hypermobility of joints, and congenital heart defect including ventricular septal defects, patent foramen ovale with left to right shunt, and persistent left superior vena cava draining into the coronary sinus. developed poor weight gain, gastroesophagial reflux, seizures and had severe developmental delay. At 7 m: height and weight under 5th percentile. At 4 y: only babbling and was unable to roll over.
0X-
N-

p21.1/
1-1
female/
47y
PBL n.a. 47,XX,+mar[12]/
46,XX[20]
der(X)(:p21.1p11.21:
:q11.2
q13.1:)
midi; cep, wcp XIST normal female, repeated abortions {0} provided from Serbia
0X-
N-

qt28/
1-1
male/
13y
PBL de novo 47,XY,+mar[23]/
46,XY[27]
inv dup(X)(qterq28:
:p28
qter)
aCGH: 152.4-154.5 MB
aCGH; FISH see below {44}
At birth, length 52 cm (90th centile), weight 3800 g (90th centile), Apgar 8-9 (1st and 5th minutes respectively). Delayed milestones; at 3 months of age patient developed slight transitory hypertonia in lower extremities. One year later unique febrile seizure during a respiratory infection. Surgical repair of right and left inguinal hernias was carried out at the age of 4 and 6 years, respectively. At 13 years: ataxic gait; weight (70 kg), height (176 cm) head circumference (56.5 cm) >97th centile; facial dysmorphism, increased intercantal distance, large ears, bilateral single palmar crease; language delayed but he is able to make sentences.
0X-
N-

qt28/
2-1
see McCl-0X-W-q27.1/1-1
-
-
-
-
-
-
-
-
-

other neocentromere X cases (no sSMC)

Kaiser-Rogers KA, Davenport ML, Powell CM, Rao KW
A recombinant X chromosome with an atypical centromere observed in a child with Turner syndrome.
Am J Hum Genet Suppl 57:A658



Cases with neocentromeres (N) - TUMOR

case no.
gender/
age at diagnosis

studied
material

de novo/
inherited

GTG-banding result
grade of mosaicism

final result of the sSMC
test
methods

clinical symptoms
Reference
0X-
N-
p or q/
1-1
-
-
-
-
-
-
-
-

N-Cases with similar imbalances NOT caused by sSMC (N-IMB):

case no.
gender/
age at diagnosis

studied
material

de novo/
inherited

GTG-banding and final FISH result test
methods

clinical symptoms
Reference
0X-
N-
IMB-
p or q/
1-1
-
-
-
-
-
-
-