case no.
|
gender/
age at diagnosis
|
studied
material
|
de novo/
inherited
|
GTG-banding
result
grade of mosaicism
|
final result
of the sSMC
|
test
methods
|
clinical
symptoms
|
Reference
|
McCl-
01-
N-
p32/
1-1 |
male/
38y |
PBL/
fibro-
blasts |
n.a. |
47,XY,del(1)(p32p36.1),
+mar1[87]/
47,XY,del(1)(p32p36.1),
+mar2[10]/
46,XY,del(1)(p32p36.1)[3]
(fibroblasts: 95/5/0; plus a
t(X;4)(q23;q13))
|
mar1
= r(1)(::p32→p36.1::)/
mar2 = r(1)(::p32→p36.1:
:p23→p36.1::) |
pan-centromeric
probe, telomeric probe, wcp1 probe; UPD-test |
infertility
and oligospermia; otherwise normal male |
{1-5; 58} |
Neocentric/
healthy
McCl-
01-
N-
p21/
1-1 |
n.a./
postnatal |
PBL |
n.a. |
47,XN,del(1)(p21p13),+mar |
r(1)(::p21→p13::) |
FISH |
n.a.,
presumably normal |
{59} 1
case |
Healthy
McCl-
01-
N-
p13/
1-1 |
male/
39y |
PBL |
n.a. |
47,XY,del(1)(p13p11.1),
+mar[100%] |
r(1)(::p13→p11.1::)
|
M-FISH; MCB,
ceps
|
normal male,
infertile
|
{70} case
1 |
Neocentric/
unclear
McCl-
01-
N-
q23/
1-1 |
male/
prenatal |
AF |
de novo |
47,XY,del(1)(q23q32),
+mar[20] |
r(1)(::q23→q32::)
"dynamic mosaic" i.e. variants of sSMC
were detected but not characterized in
detail |
wcp1;
cep1/5/19; all centromere probe |
Amniocentesis
due to advanced maternal age; no ultrasound
abnormalities; pregnancy terminated. |
{3-6} |
McCl-
02-
O-
p12/
1-1 |
male/
adult |
PBL |
de novo |
47,XY,del(2)(p12p11.1),
+mar[100%]* |
r(2)(::p12→p11.1::)
FISH-data: RP11-316G9 = AC009958.3 (89.6
MB) and RP11-294I29 = AQ508381 (88.9MB) on
sSMC |
cen2, wcp2,
YACs as specified in {11} |
Man was
studied due to a child with a phenotype
resembling Down-syndrome; child had
karyotype 46,XY,del(2)(p10p12) |
{0}
{8} |
Neocentric/
abnormal
McCl-
02-
N-
p21/
1-1 |
male/
14y |
PBL |
de novo |
47,XY,del(2)(p21p11),
+mar[100%] |
r(2)(::p21→p11::) |
wcp2,
pan-centromeric probe; telomeric probe |
moderately
mental retarded, at 32y weight and OFC at
25. centile; narrow forehead, broad
supraorbital ridges, large mouth, marked
hyperkyphosis, moderately hyperactive, IQ =
50 |
{3; 9-11} |
Neocentric/
abnormal
McCl-
02-
N-
q22/
1-1 |
female/
postnatal |
PBL
(EKF-
cellbank) |
n.a. |
47,XX,del(2)(q22q32.2),
+r(2)(q22q32.2)[81]/
46,XX,
del(2)(q22q32.2)[9] |
r(2)(::q22→q32.2::) |
midi |
mental retardation |
{12} 1
case |
Neocentric/
abnormal
McCl-
02-
N-
q32.1/
1-1 |
male/
6m |
PBL
|
de novo
|
see
below
|
r(2)(::q32.1→q36.1::)
arr[GRCh37]
2q23.1q36.1 (186,698,504_223,918,111)x3
|
aCGH, wcp,
BACs |
muscular
hypotonia |
{0}
provided from Leipzig, Germany
|
47,XY,del(2)(q32.1q36.1),+r(2)(::q32.1->q36.1::)[4]/47,XY,del(2)(q32.1q36.1),+r(2)(::q32.1->q36.1::q36.1->q32.1::)
or
der(2)(::q32.1->q36.1::q36.1->q32.1::)[3]/
48,XY,del(2)(q32.1q36.1),+r(2)(::q32.1->q36.1::q36.1->q32.1::)
or
der(2)(::q32.1->q36.1::q36.1->q32.1::)x2[1]/48,XY,del(2)(q32.1q36.1),+r(2)(::q32.1->q36.1::),+r(2)(::q32.1->q36.1::q36.1->q32.1::)
or
der(2)(::q32.1->q36.1::q36.1->q32.1::)[7]/
49,XY,del(2)(q32.1q36.1),+r(2)(::q32.1->q36.1::),+r(2)(::q32.1->q36.1::q36.1->q32.1::),+der(2)(::q32.1->q36.1::q36.1->q32.1::)[1]/
49,XY,del(2)(q32.1q36.1),+r(2)(::q32.1->q36.1::),+r(2)(::q32.1->q36.1::q36.1->q32.1::)
order(2)(::q32.1->q36.1::q36.1->q32.1::)x2[2] |
McCl-
03-
W-
p11/
1-1 |
male/
26y |
PBL/
fibro-
blasts |
de novo |
47,XY,del(3)(p11q11),
+mar[28]/
46,XY,del(3)(p11q11)[12]
mar present in 100% of skin fibroblasts |
min(3)(:p11→q11:)
Neocentromere
formation in 3q26 on del(3) chromosome. |
wcp3; cep3 |
The male was
considered to have borderline mental
retardation, and was detected due to his
newborn daughter with developmental delay,
hypertelorism, epicanthus. She inherited
only the del(3) chromosome.
|
{13; 14;
15 case 1} |
McCl-
04-
W-
p16.1/
1-1 |
male/
42y |
PBL |
n.a. |
47,XY,+mar[3]/
46,XY[14]
|
r(4)(::p16.1→p14:)
Neocentromere
formation in 3q26 on del(3) chromosome. |
midi |
normal male,
prinary infertility
|
{0,
67} case P3
|
Abnormal
McCl-
04-
W-
p15.3/
1-1 |
male/
prenatal |
AF |
de novo |
47,XY,
del(4)(p15.3q21.1),
+r[96]/
46,XY,del(4)(p15.3q21.1)[4] |
r(4)(::p15.3→q21.1::) |
cep 4,
sub-telomeric probe 4q; WHS probe |
see below |
{16} |
Amniocentesis
due to ultrasound detection of advanced
nuchal translucency, echogenic bowel, short
femurs, mild ventricular dilatation; IUGR at
5. centile; at week 32 oligohydramnion; at
week 33 no fetal movements and intrauterine
death confirmed at week 34; on delivery bay
640g ([lt]0.4 centile) and macerated;
detectable were anal atresia, neck webbing,
umbilical cord with two vessels |
Healthy
McCl-
04-
W-
p12/
1-1 |
female/
adult |
PBL |
n.a.; same
mar imbalanced in child |
47,XX,+mar[67%]/
46,XX[33%] |
47,XX,del(4)(p12q10),
+r(4)(::p12→q10::)[66%]/
46,XX,del(4)(p12q10)[33%]*
size 4.4 MB |
centr.
probes, centr.-near probes; aCGH |
see below |
{17}
{18} case 7 |
child with
mild speech delay; no dysmorphic features;
normal motor development; Mother is
intellectually normal with unilateral ear
anomalies and mild visual deficiencies |
Unclear
McCl-
04-W-
q10/
1-1 |
female/
prenatal |
AF |
de novo |
47,XX,+mar[9]/
46,XX[5] |
47,XX,del(4)(q11q13),
+r(4)(::q11→q13::)[66%]/
46,XX,del(4)(q11q13)[33%]*
size 22 MB |
aCGH |
advanced
maternal age; TOP |
{60} |
Neocentric/
abnormal
McCl-
04-W-
q12/
1-1 |
male/
6m |
PBL |
de novo |
47,XY,del(4)(q12q21.1)+mar[5]/
46,XX,del(4)(q12q21.1)[25] |
+r(4)(::q12→q21.1::)
arr(hg19):
56,288,188-77,876,928
|
aCGH |
DYS, skin
pigmentaton, DD, growth delay
|
{66} |
Neocentric/
abnormal
McCl-
04-
N-
q22.1/
1-1 |
male/
17y |
PBL/
fibro-
blasts |
de novo |
47,XY,del(4)(q21.1q21.3),
+mar[75%]/
46,XY,del(4)(q21.1q21.3)[25%]* |
r(4)(::q21.1→q21.3::)*
sSMC derived
from maternal chromosome 4 |
midi;
telomeric probes, YACs; UPD-test |
see below
|
{19; 3-5} |
neonatal
eczema, multiple infections; studied due to
Hyper-IGE syndrome with recurrent infections
(HIES); motor, language, social and
developmental milestones of patient delayed;
mother of patient borderline to mental
retardation, autism |
Neocentric/
abnormal
McCl-
04-
N-
q26/
1-1 |
female/
prenatal
|
AF
NIPT
|
n.a. |
47,XX,+mar[23]/
46,XX[21]
|
r(4)(::q26→q31.21::)*
|
NIPT |
VSD; no
further info available
|
{71}
case SJ015
|
McCl-
05-
W-
p13/
1-1 |
male/
27y |
PBL |
n.a. |
47,XY,del(5)(p13q10),
+r[68]/
46,XY,del(5)(p13cen)[2] |
r(5)(::p13→q10:
:p13→q10::) |
cep 1/5/19;
YAC 897G2 |
see below |
{20} |
Birth
weight 3500g (50th centile), OFC 38cm
(>95. centile); length 50cm (25.
centile); square asymmetric skull,
plagioturricephaly, facial asymmetry,
hypertelorism, epicantal folds, short and
broad nose, long, deep philtrum,
microretrognathism, high palate, low-set
abnormal ears, clinodactyly 5, simian
crease, hypotonia, omphalocoele, inguinal
hernias, club feet; at 20m weight at 90.
centile OFC >97. psychomotor development
delayed. |
Healthy
McCl-
05-
W-
p11/
1-1 |
male/
prenatal |
AF,
PBL |
de novo |
47,XY,del(5)(p11p13),
+mar[100%]
after array:
47,XY,der(5)(pter→p15.31:
:pter→p14.3::p11→qter),
+r(5)(::p11→q13.2::) |
r(5)(::p11→q13.2::)
array: 5p15.33-p15.31
(131,945-6,267,160)x3, 5p14.3-p13.2
(21,438,495-
36,736,934)x1,
5p12-p11 (42,529,343-
45,908,725)x3 |
BAC-FISH,
aCGH |
amniocentesis
due to advanced maternal age; normal male at
birth and at 1.5y |
{54} |
McCl-
06-
O-
p22.3/
1-1 |
male/
43y |
PBL |
n.a. |
47,XY,del(6)(p10p22.3),
+r(6)(::p10→p22.3::)[100%] |
r(6)(::p22.3→q10::)* |
wcp6, cep 6,
subtel 6p and 6q |
normal male
apart from infertility |
{21}
{22} case 10 |
Healthy
McCl-
06-
O-
p11.2~
p11.1/
1-1 |
female/
37y |
PBL |
de novo |
47,XX,del(6)(p11.2~p11.1q12),
+r(?6)[80%]/
46,XX[20%] |
r(6)(::p10→q12::)[60%]/
r(6)(::p11.2~p11.1
→q12::)[20%] |
midi/
subcenM |
normal, but
two abnormal children with mar |
{58} |
Healthy
McCl-
06-
O-
p10/
1-1 |
female/
30y |
PBL |
n.a. |
47,XX,del(6)(p10q13),
+r(6)[?%]/
46,XX[?%] |
r(6)(::p10→q13::)
array: 77.23-96.63MB |
MCB, aCGH |
normal, but
one abnormal children with mar |
{55}
mother of patient 2 |
Neocentric/
healthy
McCl-
06-
N-
q16.2/
1-1 |
male/
adult |
PBL |
de novo? |
47,XY,t(4;15),del(6)(q16.2q22.2),
+r(6)(::q16.2→q22.2::)[100%] |
r(6)(::q16.2→q22.2::)
|
all
centromeres, wcp probes, sub-telomere 6q |
mar detected
due to phenotypically abnormal child of
propositus; child had karyotype
46,t(4;15),del(6)(q16.2q22.2)[100%] |
{5; 23-24} |
McCl-
07-
N-
p22/
1-1 |
male/
2y |
PBL |
de novo |
47,XY,del(7)(p22q21.2),+ |
r(7)(p22q21.2)
|
cep 7 |
DD, DYS,
growth retardation |
{62} |
Neocentric/
abnormal
McCl-
07-
N-
q22/
1-1 |
male/
newborn |
AF/
PBL |
de novo |
AF:
47,XY,+r(7)(q22q31)[10]/46,XY[7]
PBL: sSMC only in 28% of cells
unusual complex McClintock mechanism |
r(7)(q22q31) |
M-FISH
aCGH |
DD, DYS,
growth retardation, MR |
{63} |
McCl-
08-
O-
p11.1/
1-1 |
male/
adult |
PBL |
de novo |
47,XY,del(8)(p11.1q12.1),+r(8)(p11.1q12.1)[18]/
46,XY[2] |
r(8)(::p11.1→q12.1::)*
neocentromere in 8p22 in der(8) |
aCGH, cep 8 |
normal
male, sSMC detected due to child with
clinical abnormalities due to lacking sSMC |
{25; 53;
58} |
Healthy
McCl-
08-
O-
p11.1/
2-1 |
male/
adult |
PBL |
n.a. |
47,XY,del(8)(p23q10),+r(8)(p23q10)[55]/46,XY,del(8)(p23q10)[5] |
r(8)(::p23→q10::)
|
NGS, cep 8 |
infertile |
{65} case
1
|
McCl-
09-
N-
q31/
1-1 |
female/
adult |
PBL |
n.a. |
47,XX,del(9)(q31q33),+r(9)(q31q33)[60%]/
46,XX,del(9)(q31q33)[40%] |
r(9)(::q31→q33::) |
aCGH; BAC
FISH |
mild degree
of mental retardation (IQ 69); sSMC detected
due to child with a
46,XY,del(9)(q31q33)[100%] and mild
psychomotor retardation |
{30} |
Unclear
McCl-
09-
N-
q10/
1-1 |
female/
?adult |
PBL |
n.a. |
47,XX,del(9)(q10porq?),+r(9)(q10porq?) |
n.a. |
wcp 9 |
mental
retardation |
{56} |
McCl-
10-
W-
p11.23/
1-1 |
male/
4y10m |
PBL |
inv dup (13
or 21) paternal derived |
48,XY,del(10),+r(?10),
+inv
dup(acro)[100%]
double rings
in 4-8% of the cells |
del(10)
= der(10)(pter→p11.23:
:q23.2→qter)
r(?10) = r(10)(::p11.23→q23.2::)
inv dup(acro) = inv dup(13or
21) |
cep10,
13/21; 14/22; 15; 5 different alpha sat.-
probes; satIII probe |
developmental
delay at 4y, delayed speech development,
normal motor activity, not dysmorphic;
height, length and HC ~25. centile |
{3-4; 10;
31-39} |
Neocentric/
abnormal
McCl-
10-
N-
q11/
1-1 |
female/
1w |
AF/
fibro-
blasts |
de novo |
47,XX,del(10)(q11q23),+mar[62%]/
46,XX,del(10)(q11q23)[38%]
(sSMC in 80% of fibroblasts) |
?min(10)(:q11→q23:)
(without detectable telomeres) |
alpha-,
beta-satellite satIII,telomeric, all wcp,
YAC-probes (not specified) |
mental
retardation and/or developmental delay or
structural anomalies detected at birth |
{26} case
8
{3-5, 10} |
McCl-
11-O-
p15.1/
1-1 |
female/
newborn |
PBL
fibro-
blasts |
maternal |
PBL:
47,XX,del(11)(p15.1p11.1),
+r(11)(p15.1p11.1)[70%]/
46,XX,del(11)(p51.1p11.1)[30%]
In
fibroblasts: marker in 50% |
r(11)(::p15.1→p11.1::)* |
cep 11 |
severely
dysmorphic; Turner-like phenotype with
classical bilateral aniridia, microcephaly,
Fallot tetralogy; mother with aniridia as
well - here mar in 70% of the blood cells;
otherwise normal |
{40} |
Neocentric/
abnormal
McCl-
11-N-
p14.3/
1-1 |
female/
36y |
PBL |
n.a. |
mos
47,XX,del(11)(p14.3p11.2),+r[16]/46,XX,del(11)(p.14.3p11.2)[4] |
r(11)(::p14.3→neo→11.12::) |
SNP-aCGH
without details provided |
Normal
herself, but abnormal fetus with
del(11) only |
{68} |
Neocentric/
abnormal
McCl-
11-
N-
p11.2/
1-1 |
female/
adult |
PBL |
n.a. |
47,XX,del(11)(p11.12p11.2),+mar[100%] |
r(11)(::p11.12→p11.2::) |
n.a. |
normal -
sSMC detected due to clinical abnormalities
in a child |
{5; 7} |
McCl-
12-
U
p13.1/
1-1 |
female/
3m |
PBL |
maternal |
47,XX,del(12)(p13.1→q10),+r[100%] |
r(12)(::p13.1→q10::) |
wcp12 |
mother
normal?; child? |
{27} |
McCl-
13/21-‘
U-
p11.1/
1-1 |
see
13/21-U-4 -
similar to a McClintock mechanism, but not
the same |
Neocentric/
healthy
McCl-
13-
N-
q12.3/
1-1 |
male/
29y |
PBL |
n.a. |
47,XX,del(13)(q12.3q22),
+mar[97]/46,XX,del(13)(q12.3q22)[3] |
r(13)(::q12.3→q22::) |
wcp,
array-CGH |
normal male;
fertility problems |
{51; 57;
58} |
Neocentric/
healthy
McCl-
13-
N-
q21.31/
1-1 |
female/
32y |
PBL |
de novo |
47,XX,del(13)(q21.32q22.2),
+mar[100%] |
r(13)(::q21.31→q22.2::) |
midi;
telomeric probe |
normal
female; sSMC detected due to 3 miscarriages |
{4-5,
29-30; 42} |
Neocentric/
abnormal
McCl-
13-
N-
q31.1/
1-1 |
male/
1m (?) |
PBL |
de novo |
47,XY,del(13)(q31.1q32.3),
+r(13)(::q31.1q32.3::)[50%]/
46,XY,del(13)(q31.1q32.3)[50%] |
r(13)(::q31.1→q32.3::) |
BAC-probes |
moderate
intellectual disability associated with
distinctive hand malformations (hypoplastic
and angel-shaped middle phalanges) and
partial growth hormone (GH) deficiency at 13
y |
{5; 28} |
McCl-
14-
N-
q12/
1-1 |
female/
18y |
PBL |
n.a. |
47,XX,del(14)(q12q24.3),
+r(14)(q12q24.3) |
r(14)(::q12→q24.3::) |
sequencing;
FISH |
MR, DD,
tetraplegia, osteoporosis, no speach,
seizures, DYS |
{61} |
McCl-
15-
N-
q11.1/
1-1 |
male/
14y |
PBL |
n.a. |
47,XY,del(15)(q11.1q21.1),
+r(15)(q11.1q21.1) |
r(15)(::q11.2→q21.1::) |
FISH |
Marfan
syndrome like
infertile |
{64} |
Neocentric/
unclear
McCl-
15-
N-
q11.1/
2-1 |
female/
prenatal
|
CH, AF
|
de novo
|
47,XX,+21[12]/
48,XX,+21,+mar[3] |
r(15)(::q25.2→q25.3:) |
aCGH |
Down
syndrome,. TOP
|
{69} |
McCl-
16-
W-
p10/
1-1 |
female/
23y |
PBL |
n.a. |
47,XX,del(16)(p10q13),
+r(16)(::p10→q13::)[100%]* |
r(16)(::p10→q13::) |
n.a. |
mild general
hypotonia, HC 51cm = very small; bow shaped
mouth, abnormal posteriorly rotated ears;
apart from that normal; detected due to a
malformed child without the mar but with the
del(16) chromosome |
{43} |
McCl-
16-
W-
q13/
1-1 |
male/
8y |
PBL |
n.a. |
47,XX,del(16)(q13q23),
+r(16)(::q13→q23::)[100%]* |
r(16)(::q13→q23::) |
aCGH, MCB
|
short
stature, speech delay |
{70} case
5
|
McCl-
17-
O-
p11.2/
1-1 |
moved to PsMcCl-17-O-p11.2/1-1 |
Healthy
McCl-
17-
U-
p10/
1-1 |
female/
82y |
PBL
skin
fibro-
blasts |
de novo |
48,XX,del(17)(p10q11.2),+r[2%]/
47,XX,del(17)(p10q11.2),+r[~75%]/
47,XX,del(17)(p10q11.2),+r(dic)[12%]/
47,XX,del(17)(p10q11.2),+mar[~5%]/
46,XX,del(17)(p10q11.2)[6%]*
similar in blood and fibroblasts; |
marker
derived from (17)(p10q11.2) |
centromeric
probe for chromosome 17 |
no
congenital malformations; suffering from
neurofibromatosis type 1 since age of 40y;
neither her parents nor her children had
NF1. Children with normal karyotypes. |
{47} |
McCl-
19-
W-
p10/
1-1 |
male/
1m(?) |
PBL |
maternal
47,XX,del(19) (p10q13.2),+r(19) |
47,XY,+r[100%] |
r(19)(::p10→q13.2::)* |
FISH probe
wcp 19 |
see below |
{48} |
Delivery in
week 37 because of maternal blood
hypertension; birth weight 2280g; overweight
syndrome at 3-4y → every mensurartions were
more than 3S.D. except for the length.
Additionally macrocephaly, hypertelorism,
antimongoloid slants, bluish ring around the
eyes, globular prominent nose, abnormal
mouth, large ears, arms and legs short and
podgy, mental retardation (DQ=69) |
McCl-
22-
O-
q11.1/
1-1 |
female/
44y |
PBL |
n.a. |
47,XX,del(22)(p11.1q11.2)
+mar[16]/
46,XX,del(22)(p11.1q11.2) |
r(22)(::q10q11.2::) |
DiGeorge
CR-probe; array-CGH |
normal
female; mar detected due to repeated
children with heart defects |
{52; 58} |
Abnormal
McCl-
22-
W-
q11.2/
2-1 |
male/
infant |
PBL |
maternal
47,XX,del(22)(q11q11.2),
+r(22)(q10q11.2) |
47,XY,+mar[100%] |
r(22)(::q10q11.2::) |
cep probes;
TUPLE1 probe |
CHARGE
association |
{49} |
McCl-
0X-
W-
p21/
2-1 |
female/
1y |
PBL |
de novo |
47,X,del(Xq),+r[20%]/
46,X,del(Xq)[80%]
in fibroblasts. 40/10 |
del(X)
= der(X)(pter→q21.1:
:p21→pter)
r = r(X)(::p21→
q11~12::) |
cep X; wcp
X; pericentric probes; STS, KAL; UBE1XIST
specific probe |
see below |
{50} |
pregnancy
and birth normal; birth weight 30. centile;
length 10. centile; OFC 25. centile;
syndactyly of right finger 3 and 4 and left
toes 4 and 5; cardiac murmur due to
ventricular and artrial septal defect and
patent ductus arteriousus plus pulmonary
stenosis; agenesis of corpus callosum, mild
cerebral ventricular dilatation; a t 1y
severely handicapped, no speech, hypotonia,
broad face, short neck, prominent forehead,
telecanthus, convergent strabismus, small
abnormal nose, prominent inverted V-shaped
upper lip, short philtrum, low set and
mildly posteriorly rotated ears |
Abnormal
McCl-
0X-
W-
q27.1/
1-1 |
male/
4.5y |
PBL |
n.a. |
47,XY,+mar[35]/
46,XY |
r(X)(q27.1q28) |
aCGH |
see below |
{0}
provided by family |
in
sonography enhanced nuchal transluciency;
born normal; at 2 months reflux, at 6 months
growth retardation (lenght 0.4th centile),
DD, i.e. crawling with 20 months, walking at
2 years; at 4.5 years only 2 word sentences;
slight dysmorphism; small head,
hypogonadotropic hypogonadism; now under
groth hormons.
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