ChromosOmics - Database

Icon by Leon Liehr                   

                                                  CHROMOSOME #6 -                                                 
NEOCENTRIC
 
Cases without clinical findings
Similar imbalances – no sSMC
Cases with clinical findings
Similar imbalances – no sSMC
Cases without clear clinical correlation
Cases with discontinous sSMC
Cases with complex sSMC
Cases with UPD and sSMC
Cases with neocentromeres
Similar imbalances
Tumor
DISCLAIMER
In general 70% of sSMC carriers are clinically normal. The figures listed above

are based on the bias, that mainly clinically aberrant cases are studied and reported in literature!


UPD (uniparental disomy) cases: UPD(6)mat UPD(6)pat UPD(6)mat or pat

Cases with neocentromeres (N)


case no.
gender/
age at diagnosis

studied
material

de novo/
inherited

GTG-banding result
grade of mosaicism

final result of the sSMC
test
methods

clinical symptoms
Reference
06-
N-
pt25.3/
1-1
male/
newborn
PBL de novo 47,XY,+mar[25]/
46,XY[22]
inv dup(6)(pterp23:
:p23
pter)
hg19: 14.548093 Mb

aCGH growth retardation, DYS, DD, death after birth
{48}
06-
N-
pt25.3/
2-1
male/
2y
PBL n.a. 47,XY,+mar[25]/
46,XY[22]
inv dup(6)(pterp22.1:
:p22.1
pter)
hg38: 28.285082
Mb
aCGH DD, DYS
skin pigmentary mosaicism

{50} case 5
06-
N-
q16.2/
1-1
see McCl-06-N-q16.2/1-1 {16; 24; 25}
06-
N-
q24/
1-1

male/
1y
PBL n.a. 47,XY,+mar[100%] r(6)(::q24→q25::) midi see below {0} provided from Germany
arthogryposis, hypospadia, mild pulmonal stenosis, growth retardation (3rd-25th centile), slightly facial dysmorph
06-
N-
qt26/
1-1

n.a./
prenatal
AF de novo 47,+mar[60%]/
46[40%]
mar not in fetal blood but in placenta
inv dup(6)(qterq26:
:q26
qter)*
all centromeres, wcp probes, sub-telomere 6q see below {14; 25}
sSMC detected in 16th wog; baby born at 41st wog, APGAR 10/10; at 2 y normal psychomotor development, microcephaly, mild hearing loss

Cases with neocentromeres (N) - TUMOR


case no.
gender/
age at diagnosis

studied
material

de novo/
inherited

GTG-banding result
grade of mosaicism

final result of the sSMC
test
methods

clinical symptoms
Reference
06-
N-
q/
1-1
-
-
-
-
-
-
-
-

N-Cases with similar imbalances NOT caused by sSMC (N-IMB):

case no.
gender/
age at diagnosis

studied
material

de novo/
inherited

GTG-banding and final FISH result test
methods

clinical symptoms
Reference
06-
N-

IMB-
p2?/
1-1 to
7-1
7 cases with partial trisomy of 6pter; see also {33} {27-30; 33}
-
-
-
-
-
-
-
-