ChromosOmics - Database

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                                                  CHROMOSOME #4 -                                                 
ABNORMAL
Cases with clinical findings (W)


case no.
gender/
age at diagnosis

studied
material

de novo/
inherited

GTG-banding result
grade of mosaicism

final result of the sSMC
test
methods

clinical symptoms
Reference
04-
W-
p15.3/
1-1

see McCl-04-W-p15.3/1-1
{17}
04-
W-
p15.3/
2-1
n.a./
prenatal
AF de novo
47,+mar
min(4)(pterq10:) n.a. ultrasound abnormalities, TOP {33} 1 case
04-
W-
p1?5/
1-1
male/
2.5 y
PBL n.a. 47,XY,+r[4]/
46,XY[26]
min(4)(:p1?5q12:) cenM; subcenM DD, dwarphism {0} provided from Germany
04-
W-
p14/
1-1
see 04-U-8
***
04-
W-
p14/
1-2

°°°
female/
prenatal
AF; placenta de novo 47,XX,+mar[29]/
46,XX[12]
in placenta mar in 60% of cells
min(4)(:p14q11.1:)
array-data: 39.8-48.9MB
M-FISH; subcenM; aCGH; UPD-test see below {34}
Amniocentesis due to nuchal translucency 3.9mm in week 14+3 , nose bone 1.5mm in week 13; born in week 39 of pregnancy, weight 3740g. At age of 3 years 6 months the patient has no external malformations; size, weight and head circumference are all at 50th percentile. She showed psychomotor retardation, i.e. sitting with 8 months, walking with 1 year of age, delayed language development, now speaking 4-5 word sentences.
04-
W-
p12/
1-1

see McCl-04-W-p12/1-1
{22}
{26} case 7
04-
W-
p12/
2-1
male/
19m
PBL maternal
(in mother in 67% of PBL)
47,XY,+r[21]/
46,XY[9]
r(4)(::p?12q?12::)* cep probes, wcp 4 see below {31}
In child: at 1 y bilateral cataracts, failure to thrive, hyperactivity; In mother and child: relative microcephaly, triangular shape of face, down slanted and prominent eyes, broad tip of the nose, broad palms and soles, hyperpigmented areas of skin, wide sandal gaps.
04-
W-
p12/
2-2
male/
4y
PBL de novo 47,XY,+mar[8]/
46,XY[42]
min(4)(:p12q12:) cenM; subcenM see below {0} provided from Serbia
walking at 19 months, no speech, mental retardation, sleep disturbance, self injury, macrocrania, large prominent ears, short nose, short hands and fingers
04-
W-
p12/
3-1
n.a./
postnatal
PBL paternal 47,+mar[60%]/
46[40%]
r(4)(::p12q13.2::)*
size in p 4.2 MB and in q 18.0MB
subcenM with 3 BACs; aCGH see below {26} case 8
DD; walked at 18 months of age; attention deficit hyperactivity disorder (ADHD); unilateral partial vision loss (etiology unknown); mild to moderate dysmorphic features; Tourette syndrome; Father has marker in 19 of 32 (= 60%) of peripheral lymphocytes. Father has mild intellectual disabled
04-
W-
p12/
3-2
female/
prenatal
AF,
other tissues
de novo 47,XX,+mar[17]/
46,XX[19]
in other tissues diff. mosaics observed
r(4)(::p12q13.2::)
aCGH: 46.18-67.85 MB
SKY; aCGH see below {26} case 9
Amniocentesis due to advanced maternal age; TOP; autopsy revealed hypertelorism, epicanthic folds, a prominent nose, a triangular face, low-set ears, clinodactyly of the fingers, and small big toes.
04-
W-
p11/
1-1
female/
1y
PBL n.a. 47,XX,+mar[26]/
46,XX[4]
min(4)(:p11q11:) cenM, subcenM;
UPD-test
see below {0} provided from Germany
As newborn hypotrophy; born in week 38+6, weight 2250g, length 47cm, OFC 31cm; at 13m psychomotor retardation (no sitting up) microcephaly (P3), dystrophy weight 7.35 k, length 70cm (P3), slightly dysmorphic (form of the head, large sutura metopica and ears, short neck, deep voice).
04-
W-
p11/
1-2

°°°
male/
3y
PBL n.a. 47,XY,+mar[100%] min(4)(:p11q12:)
array: 52.43-57.74
cenM, subcenM;
aCGH
DD {0} provided from Australia
04-
W-
p11/
2-1

°°°
male/
prenatal
AF and PBL
(EKF-
cellbank)
de novo 47,XY,+mar[24]/
46,XY[16]
in PBL: 47:13
min(4)(:p11q12:)[9]/ min(4)(:q12p11:
:p11
q12:)[1]
cenM, subcenM see below {0} provided from Greece
mild motor retardation compared to twin brother; no morphogenetic variants other than mild blepharophimosis inherited from mother; mild hypertonia and irritability; two central incisors in the mandible. Brain and kidney, U/S, hearing evoked potentials, and ophthalmological investigation gave normal results.
04-
W-
p11/
2-2

°°°
female/
prenatal
AF n.a.
47,XX,+mar[100%]
mar(4)(:p11q12:)
array: 52.38-54.86
aCGH TOP; Dysmorphic features: hypertelorism, long philtrum {40} case 5
04-
W-
p10/
1-1

°°°
male/
27y
PBL de novo 47,XY,+r[100%] r(4)(::p10q12::) all centromeric probes; wcp 4 see below {13} case B
Pregnancy and birth normal; motor development delayed from birth on; in late teens diagnosed with insulin-dependent diabetes mellitus; at 27y severe mental retardation, no development of language skills; height 160cm, weight 76 cm, HC 98th percentile, central obesity with gynecomastia and kyphosis, dysmorphic face (narrow forehead, ridged occiput, downwards slanting palpebral fissures, down-turned mouth, short philtrum, narrow pinna), narrow fingers with bilateral clinodactyly of 5th finger, syndactyly of toes 2 and 3
04-
W-
p10/
1-2

°°°
female/
6y
PBL de novo 47,XX,+mar/
48,XX,+mar,+mar/
49,XX,+mar,+mar,+mar [82%]/
46,XX[18%]
min(4)(:p10q13:)
(sSMC is derivative of a maternal chromosome 4)
CGH, cep 4, centromere near probes;
UPD-test
DD, minor facial dysmorphism, postnatal overgrowth {20; 23}

W-Cases with similar imbalances NOT caused by sSMC (W-IMB)

case no.
gender/
age at diagnosis

studied
material

de novo/
Inherited

GTG-banding and final FISH result test
methods

clinical symptoms
Reference
04-
W-

IMB-
q12/
1-1

°°°
male/
2.7y
PBL de novo 46,XY,dup(4)(q12q13) n.a. microcephaly, mental retardation, and minor facial anomalies {28}
04-
W-

IMB-
q12/
2-1

°°°
female/
6y
PBL maternal
(balanced)
46,XX,der(18)ins(18;4)(q22;q12q13) n.a. see below {29}
At 6y short stature, microcephaly with brachycephaly, bilateral epicantal fold, microdontia, pronounced philtrum, and other minor DYS
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-
-
-
-
-
-
-

W-cases with unclear/insufficient characterization of the sSMC (CW)

case no.
gender/
age at diagnosis

studied
material

de novo/
inherited

GTG-banding result
grade of mosaicism

final result of the sSMC
test
methods

clinical symptoms
Reference
04-
CW-
1
male/
prenatal
AF de novo 47,XY,+mar [100%] r(4) all available centromeric probes Amniocentesis due to ultrasound-result: alobar holo- prosencephaly, TOP {7} case A {11} case 1
04-
CW-
2
female/
4y
PBL de novo 47,XX+mar[16%]/
46,XX[84%]
r(4) SKY; telomeric probes see below {9; 10}
At birth length: 51cm; at 4y non-specific dysmorphic features and mild mental retardation plus no speech;; at 11y she underwent a scoliosis fusion level D5-L1 due to dextro-convex thoracal scoliosis; at age of 10 y IQ 80, later on she could follow normal school education. At 22 she was a phenotypically normal female except for macrosomia (length 183cm).
04-
CW-
3
female/
prenatal
AF de novo 47,XX+mar[100%] r(4) different FISH probes (D4Z1; wcp4) Fetal pathology detected in ultrasound due to advanced maternal age; alobar holoprosencephaly confirmed after termination {4} case 16
{5} case 1
04-
CW-
4
female/
n.a.
n.a. n.a. 47,XX,+r[30]/
46,XX[20]
r(4) SKY dysmorphic features, more prominent on the right {6} case MP3
04-
CW-
5
male/
14y
PBL n.a. 47,XY,+mar[100%] min(4)(:p1?5→q11.1:) cenM, subcenM MR  (oligophrenia), growth retardation, strabismus, upward slant to the eyes, high-arched palate, abnormal teeth positioning {0} provided from Russia