ChromosOmics - Database

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                                                          multiple sSMC -                                  
                         - from 3 different CHROMOSOMES derived -    
                                           


ONLY CASES ARE INCLUDED HERE, WHERE THE ORIGIN OF THE sSMC WAS CHARACTERIZED
CASES DESCRIBED IN PRE-FISH ERA ARE NOT LISTED.

In general 70% of sSMC carriers are clinically normal. The figures listed here

are based on the bias, that mainly clinically aberrant cases are studied and reported in literature!
Also cases with multiple sSMC are more likely to lead to clinical aberrations than cases with one sSMC.


case no.
gender/
age at diagnosis

studied
material

de novo/
inherited

GTG-banding result
grade of mosaicism

final result of the sSMC
test
methods

clinical symptoms
Reference
mult
3-1
male/
prenatal
AF
Fibroblasts
de novo 49,XY,+r1,+r2,+r3/
48,XY,+r1,+r2/
48,XY,+r1,+r3/
47,XY,+r1/
47,XY,+r2/
47,XY,+r3/
46,XY
r1 = r(4;4)[~53%].ish (cep++;wcp-)
r2 = r(17)[~55%].ish (cep+;wcp-)
r3 = r(20)[~30%].ish (cep+,wcp+)

all centromeric probes and wcp probes amniocentesis due to advanced maternal age; pregnancy terminated in week 21; fetal pathology showed minor dysmorphic features (slight brachycephaly, large anterior fontanels, hypertelorism, nuchal thickening) {1} case 1
mult
3-2
male/
prenatal
AF de novo 49,XY,mar1,+mar2, +mar3[?]/
48,XY,+mar1,+mar2[7]
mar1 = mar(12)
mar2 = mar(19)
mar3= mar(13/21)
n.a. amniocentesis due to abnormal ultrasound findings; at birth developmental delay and dysmorphic features {25} case 103
mult
3-3
male/
prenatal
AF de novo 48-50,XY,+r,
+1-3mar[11]/
47-49,+1-3mar[10]
mar(4); mar(8), mar(non-acrocentric) n.a. amniocentesis due to advanced maternal age; normal at 20 months {25} case 104
mult
3-4
female/
prenatal
AF
skin fibroblasts
de novo 47~50,XX,+mar1,
+mar2,+mar3[cp50]
mar(3); mar(7);
mar(8)
all centromeric probes, all wcp probes amniocentesis due to enhanced Down syndrome risk after prenatal serum screening, normal ultrasound; TOP in week 22; autopsy: small VSD, cliteromegaly, pulmonary segmental defects {29}
mult
3-5
male/
4m
PBL
(EKF-
cellbank)
de novo 49,XY,+3mar[13]/
48,XY,+2mar[22]/
47,XY,+mar[23]/
46,XY[2]
r(4)(::p12q12::)[?]
min(8)(:p11.21→q11.21::)[6]
min(8)(:p21.1→p12: :p11.21→q11.21:)[14]
40.08-53.56 MB (hg19)
r(11)(::p11.12
q11.1::)[?]
acc. to NGS sSMC(8) is a
mar(8)(:p11.21→q11.23:
:q12.1q12::q12q12:) spanning
chr8:g[:53561524::GCCCTAAGGAATCTCC:
:60002688_60002774::TGG:
:55759348_55759565:
:TGATGTGTCACCTTGCTTTTAGATCTGAAGGTGA:
:40082798:]

cenM;
subcenM;
CR-FISH;
NGS
Pierre-Robin-sequence, ventricular septum defect, patent foramen ovale, cryptochism, flaccid joints, gothic palate, umbilical hernia, at birth urinary tract infection {54} postnatal case
{56} case 6
{58} case sSMC8a
mult
3-6
male/
4y
PBL de novo 49,XY,+3mar[9]/
48,XY,+2mar[25]/
47,XY,+mar1[13]/
47,XY,+mar2[14]/
46,XY[3]
mar1 = mar(5)(:p11q11.2:)
49.73-52.94MB
mar2 = mar(8)(:p21.1
q11.22:)
19.15-51.87MB
mar3 = min(9)(:p13.3
q11:)
34.25-39.18MB
aCGH Mental retardation, hypertelorism, upslanting palpebral fissures, bifid uvula, hypospadias, right testicular ectopia, syndactyly toes 2 and 3, obesity
{37} case P-14
mult
3-7
female/
15y
PBL de novo 49,XX,+3mar[?%]/
48,XX,+2mar[?%]/
47,XX,+mar[?%]
mar1 = min(2)(:p11.2q11.2:)
88.11-99.00MB
mar2 = min(3)(:p12.1
q11.1:)
86.20-90.26MB
mar3 = min(7)(:p11.21
q11.1:)
?-.MB
aCGH Short stature, short webbed neck, low hair line, short hands, stubby fingers, generalized hypotonia, short 3-4 toes
{37} case P-15
mult
3-8
see multi 4-12
mult
3-9
male/
3y
PBL de novo 49,XY,+3mar[9]/
48,XY,+2mar[16]/
47,XY,+mar[1]
dic r(15)ins(15;5)(?;q35.5q35.3)
min(18)(:p11.21
q11.1:)*
min(18)(:p11.1
q11.1:)*
#5: 178.49-179.52MB
#15: 20.37-29.35MB
#18: 11.69-17.15MB
aCGH, cep probes
locus specific probes
during pregnancy preeclampsia, walking with 15m, language development severely delayed; hyperactive, at 3y: weight and height ~90th centile, dysmorphic face {40; 49}
mult
3-10
female/
4y
PBL n.a. 49,XY,+3mar[2]/
48,XY,+2mar[18]/
47,XY,+mar[8]
46,XX[2]
der(1)
(:p11.2
q1?2:)
der(12)(:p13.3
q13.11:)
der(18)(:p11.21
q1?1:)
aCGH, cep probes severe mental retardation, absent speech, prominent forehead, epicanthus folds, hypertelorism, large ears, depressed broad nasal bridge, long smooth philtrum and a wide mouth with thin upper lip. She still walks on the tips of her toes
{41; 51}
mult
3-11
female/
postnatal
PBL de novo 49,XY,+3mar[?]/
48,XY,+2mar[?]/
47,XY,+mar[?]
min(2)(:p11.1→q11.1:)
der(18)(:p11.21q11: :q11
p11.21:)
der(?)
#18: ~0.52MB in p euchromatin
pericentric BAC-probe set
no clinical signs {50} case 15
mult
3-12
female/
postnatal
PBL n.a. 49,XX,+3mar[5]/
48,XX,+2mar[4]/
47,XX,+mar[1]
min(7)(:p11.1q11.1:)[5]/min(7)(:p11.1q11.21:)[2] - no sSMC(7) in 3/10 metaphases;
min(8)(:p11.21→q11.1:)[4]/
min(8)(:p11.1
q11.1:)[1] - no sSMC(8) in 5/10 metaphases;
min(10)(:p11.21
q11.1:)[9] - no sSMC(10) in 1/10 metaphases

cenM, subcenM n.a. {0} provided from Portugal
mult
3-13
n.a./
newborn
PBL n.a. 49,XN,+mar1, +mar2,+mar3 mar(1)
mar(6)
mar(9)
possibly #17 material also in one complex sSMC
aCGH respiratory distress and suspected sepsis {53} case 1
mult
3-14
n.a./
prenatal
AF
n.a. 49,XN,+mar1, +mar2,+mar3 mar(13)(p?terq12.11:)
mar(15)(p?ter
q11.1:)
mar(20)(:p12.1
→q11.21:))
aCGH
ceps
AMA, TOP
{57}
mult
3-15
n.a./
postnatal
PBL
de novo 49,XN,+mar1, +mar2,+mar3 r(X)(::p21.3→p21.1:)
min(2)(:p11.2
q11.2:)
min(14)(pter
q13.1:)
aCGH
FISH
DD, DYS
{0}
mult
3-16
female/
1y
PBL
de novo 49,XX,+mar1,+mar2,+mar3[22]/
48,XX,+mar1,+mar2[28]
mar1: der(19)(:p13.11q11:)
mar2: der(19)(:p12
q12:)
mar3: der(17)(:p11.2q11.2:)
aCGH (hg19):  17p11.2q11.2(21532484_27994177)x2-3 19p13.11p12(19606544_21964210)x3 19p12p12(21964256_23871690)x4
19q12q11(23872489_24507141)x3
aCGH
FISH
at birth minor VSDs, failure to thrive from a post-crichoid cushion - after surgery normal growth. no speech at 1y and DD
{0}
mult
3-17
female/
2y
PBL
de novo 49,XX,+mar1,+mar2,+mar3[?100%] min(8)(:p11.23q12.1::q22.2q22.3:)
min(13 or 21)(:p11.2
q11:)
min(16)(:p11.2
q12.1:)
FISH
DD, DYS
{0} provided from Germany