ChromosOmics - Database

Icon by Leon Liehr                   

                                                  CHROMOSOME #5 -                                                 
NEOCENTRIC
 
Cases with neocentromeres (N)


case no.
gender/
age at diagnosis

studied
material

de novo/
inherited

GTG-banding result
grade of mosaicism

final result of the sSMC
test
methods

clinical symptoms
Reference
05-
N-
pt15.1/
1-1
male/
22m
PBL de novo 47,XY,+mar[10]/
46,XY[18]
inv dup(5)(pterp15.1:
:p15.1
pter)
aCGH: 0-17.65 Mb
wcp; BACs; aCGH alternating hypo- and hyperthyroidsm treated until 9m of age; at 11m complex hyerthermal seizures andf hypotonia; at 22m dysmorhic signs noticed {59}
05-
N-
pt15.1/
1-2
male/
3y
PBL de novo 47,XY,+mar[10]/
46,XY[28]
inv dup(5)(pterp15.1:
:p15.1
pter)
aCGH (hg19): 0-15,009,591
aCGH see below {62}
Birth weight 3650g (82nd centile) length 53cm (87th centile). No congenital anomalies; as infant feeding difficulties and recurrent upper airways infections; psychomotor development delayed. Pyelectasia, foramen ovale apertum and hiatal hernia were detected at the age of 14m, in brain MRI cyst in posterior cranial fossa. At 3y 5m global developmental delay. No walking, no speech ans aggressive behavior with biting. Hypotonia (central hypotonic syndrome), hypermobility of joints and pedes planovalgi. Height 96cm (11th centile), weight 13.5kg (7th centile), head circumference 52.5cm (96th centile). Dysmorphic features with dolichocephaly, frontal bossing, low set ears, abnormality of the pinna, hypotelorism, downslanted palpebral fissures, epicanthus, depressed nasal bridge, low hanging columella, long philtrum, thin upper lip vermilion, short chin, slight midface retrusion, single transverse palmar crease on the right hand, pectus excavatum, and kyphosis. At 5y height 110[nbsp]cm, weight 15.5kg (2th centile), head circumference 54cm (95th centile). No speech and feeding and chewing difficulties persisted, but able to walk independently. Symptoms of an autism spectrum disorder. In addition, a small umbilical hernia was present. Midface retrusion and short chin observed previously were not present, but the forehead was even more prominent.
05-
N-
pt14/
1-1
female/
1w
AF/
PBL
de novo 47,XX,+mar[19] inv dup(5)(pterp14:
:p14
pter)
(sSMC derived from a paternal chromosome 5)
midi;
all human centromere probe; telomere probe, cep 1/5/19; UPD-test
see below {7; 10; 11; 21}
Amniocentesis due to severe microretrognatia in ultrasound; delivery was induced in week 37 due to cessation of intrauterine growth; weight <3rd centile, length and HC 3rd centile; APGAR 1/6/7; microretrognatia, cleft hard and soft palate; muscular hypotonia; at 4.5m length, weight and OFC <3rd centile; severely dystrophic, delayed psychomotor development; microcephaly, prominent forehead, telecanthus, upward slanting palpebral fissures, short nose with depressed nasal bridge, prominent philtrum, large and thin ears, thorax asymmetry, left convex scoliosis of thoracic spine, atrial septal defect, epilepsy
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Cases with neocentromeres (N) - TUMOR


case no.
gender/
age at diagnosis

studied
material

de novo/
inherited

GTG-banding result
grade of mosaicism

final result of the sSMC
test
methods

clinical symptoms
Reference
05-
N-
p or q/
1-1
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N-Cases with similar imbalances NOT caused by sSMC (N-IMB):

case no.
gender/
age at diagnosis

studied
material

de novo/
inherited

GTG-banding and final FISH result test
methods

clinical symptoms
Reference
05-
N-

IMB-
p1?/

1-1 to 11-1
8 partial trisomy 5p cases summarized in {23}, 11 in {30}  {23, 30}
05-
N-

IMB-
p14/

2-1
46,XX,trp(5)(pterp14::p14p15.33::p15.33qter) {24}
05-
N-

IMB-
q35.1/

1-1
46,XX,inv dup(5)(q35.1qter) {28}
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